Quantum Motif Clustering
نویسندگان
چکیده
We present three quantum algorithms for clustering graphs based on higher-order patterns, known as motif clustering. One uses a straightforward application of Grover search, the other two make use approximate counting, and all them obtain square-root like speedups over fastest classical in various settings. In order to counting context clustering, we show that general weighted performance spectral is mostly left unchanged by presence constant (relative) errors edge weights. Finally, extend original analysis better understand role multiple `anchor nodes' motifs types relationships this method can cannot capture.
منابع مشابه
Scalable Motif-aware Graph Clustering
We develop new methods based on graph motifs for graph clustering, allowing more efficient detection of communities within networks. We focus on triangles within graphs, but our techniques extend to other clique motifs as well. Our intuition, which has been suggested but not formalized similarly in previous works, is that triangles are a better signature of community than edges. We therefore ge...
متن کاملClustering sequence sets for motif discovery
Most of existing methods for DNA motif discovery consider only a single set of sequences to find an over-represented motif. In contrast, we consider multiple sets of sequences where we group sets associated with the same motif into a cluster, assuming that each set involves a single motif. Clustering sets of sequences yields clusters of coherent motifs, improving signal-to-noise ratio or enabli...
متن کاملDiscovering larger network motifs: Network Motif clustering
In this project, we aim to discover large network motifs. The main idea would be 1) combining smaller network motifs and extend it to larger network motifs or 2) using clustering algorithms to find more compact representation for the whole network, then using existing or new algorithm for finding network motifs. In order to find the appropriate approaches, we reviewed some of related papers, ab...
متن کاملQuantum Annealing for Clustering
This paper studies quantum annealing (QA) for clustering, which can be seen as an extension of simulated annealing (SA). We derive a QA algorithm for clustering and propose an annealing schedule, which is crucial in practice. Experiments show the proposed QA algorithm finds better clustering assignments than SA. Furthermore, QA is as easy as SA to implement.
متن کاملCombining phylogenetic motif discovery and motif clustering to predict co-regulated genes
MOTIVATION We present a sequence-based framework and algorithm PHYLOCLUS for predicting co-regulated genes. In our approach, de novo discovery methods are used to find motifs conserved by evolution and then a Bayesian hierarchical clustering model is used to cluster these motifs, thereby grouping together genes that are putatively co-regulated. Our clustering procedure allows both the number of...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Quantum
سال: 2023
ISSN: ['2521-327X']
DOI: https://doi.org/10.22331/q-2023-07-03-1046